Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CCL20P78556 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCL20P78556 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CCL20P78556 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.34□□□□□ -1.72
CCL20P78556 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCL20P78556 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL20P78556 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 AC012254.3-201ENST00000591183 2117 ntBASIC4.33□□□□□ -1.72
CCL20P78556 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 AC009220.2-201ENST00000489759 1751 ntBASIC4.33□□□□□ -1.72
CCL20P78556 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL20P78556 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCL20P78556 GAPDHP24-201ENST00000328713 983 ntBASIC4.33□□□□□ -1.72
CCL20P78556 RNU1-134P-201ENST00000362935 165 ntBASIC4.33□□□□□ -1.72
CCL20P78556 RNA5SP85-201ENST00000365378 119 ntBASIC4.33□□□□□ -1.72
CCL20P78556 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 SNORD56.6-201ENST00000384569 71 ntBASIC4.33□□□□□ -1.72
CCL20P78556 RPL10P10-201ENST00000403509 664 ntBASIC4.33□□□□□ -1.72
CCL20P78556 RN7SKP205-201ENST00000410999 307 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AL360013.1-201ENST00000419031 858 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 HSPE1P16-201ENST00000426640 348 ntBASIC4.33□□□□□ -1.72
CCL20P78556 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 PSMD8P1-201ENST00000436275 769 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AL592114.2-201ENST00000440142 532 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL20P78556 AL445466.1-201ENST00000448432 357 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL20P78556 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.33□□□□□ -1.72
CCL20P78556 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 AC008868.1-201ENST00000509786 737 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL20P78556 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL20P78556 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 BCAS2P1-201ENST00000528022 632 ntBASIC4.33□□□□□ -1.72
CCL20P78556 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL20P78556 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 AP005136.2-201ENST00000583253 1049 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL20P78556 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 AC024884.1-201ENST00000620583 399 ntBASIC4.33□□□□□ -1.72
CCL20P78556 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL20P78556 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 SMG1P7-201ENST00000565246 2704 ntBASIC4.33□□□□□ -1.72
CCL20P78556 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL20P78556 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL20P78556 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL20P78556 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.32□□□□□ -1.72
CCL20P78556 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 MTCO1P28-201ENST00000574177 1528 ntBASIC4.32□□□□□ -1.72
CCL20P78556 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCL20P78556 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.32□□□□□ -1.72
CCL20P78556 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 ZNF652P1-201ENST00000442420 1309 ntBASIC4.32□□□□□ -1.72
CCL20P78556 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 RNA5SP77-201ENST00000365394 120 ntBASIC4.32□□□□□ -1.72
CCL20P78556 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCL20P78556 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCL20P78556 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 SNORD94-201ENST00000386037 137 ntBASIC4.32□□□□□ -1.72
CCL20P78556 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.32□□□□□ -1.72
CCL20P78556 RN7SKP16-201ENST00000410180 299 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AL357752.1-201ENST00000412817 349 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 AC006509.1-201ENST00000420788 634 ntBASIC4.32□□□□□ -1.72
CCL20P78556 OR5M12P-201ENST00000423388 929 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 OR2AH1P-201ENST00000425717 928 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AL389925.1-201ENST00000432257 728 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 RPS7P4-201ENST00000444127 582 ntBASIC4.32□□□□□ -1.72
CCL20P78556 RPS12P20-201ENST00000464109 380 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms