Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 RN7SL836P-201ENST00000476140 296 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 RPL34P33-201ENST00000486062 334 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 HMGN1P15-201ENST00000513870 295 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 ZNF519P4-201ENST00000514008 125 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 Y_RNA.710-201ENST00000516975 110 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.92□□□□□ -1.62
CX3CL1P78423 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC121758.1-202ENST00000556917 658 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.92□□□□□ -1.62
CX3CL1P78423 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC138207.8-204ENST00000579588 527 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC022106.1-201ENST00000612834 766 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AL645927.2-201ENST00000618350 349 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AL163051.2-201ENST00000618976 735 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AL158062.1-201ENST00000619632 745 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC092159.4-201ENST00000624944 550 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC000095.2-202ENST00000637415 154 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AP000550.3-201ENST00000637734 379 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 OR7A1P-202ENST00000641542 1158 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC123769.1-201ENST00000530992 3192 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CL1P78423 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CX3CL1P78423 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CL1P78423 RNU6-1176P-201ENST00000390955 107 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 RNA5SP198-201ENST00000410376 127 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AL359885.1-201ENST00000415786 903 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 GTF3AP1-201ENST00000416942 1004 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL590399.2-201ENST00000427536 309 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 BX119321.1-201ENST00000428912 797 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 SCAND3P1-201ENST00000439854 1060 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 RPL7L1P3-201ENST00000455249 689 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC108751.3-201ENST00000461814 1020 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC073594.1-201ENST00000462065 364 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 OR11I1P-201ENST00000486033 954 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 RN7SL568P-201ENST00000493069 298 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC104629.1-201ENST00000494226 508 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC093763.2-201ENST00000505334 1223 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC113367.2-201ENST00000505749 160 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 DUX4L52-201ENST00000549363 777 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AP001823.1-201ENST00000604056 1003 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL591167.1-201ENST00000607321 456 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AL356608.1-201ENST00000610034 820 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AL135999.3-201ENST00000610501 812 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 uc_338.29-201ENST00000615099 168 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms