Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 AC126175.1-201ENST00000617041 758 ntBASIC5.88□□□□□ -1.47
CDH4P55283 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 AL390318.1-201ENST00000624564 687 ntBASIC5.88□□□□□ -1.47
CDH4P55283 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 AC132825.8-201ENST00000640783 297 ntBASIC5.88□□□□□ -1.47
CDH4P55283 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 AC007842.1-201ENST00000597336 2039 ntBASIC5.87□□□□□ -1.47
CDH4P55283 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH4P55283 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH4P55283 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH4P55283 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 RNU6-673P-201ENST00000365084 104 ntBASIC5.87□□□□□ -1.47
CDH4P55283 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 MIR130A-201ENST00000385274 89 ntBASIC5.87□□□□□ -1.47
CDH4P55283 RNA5SP91-201ENST00000390902 119 ntBASIC5.87□□□□□ -1.47
CDH4P55283 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 RNA5SP178-201ENST00000410380 128 ntBASIC5.87□□□□□ -1.47
CDH4P55283 RNU6-233P-201ENST00000410845 141 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 AL662874.1-201ENST00000426065 230 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 RPL12P16-201ENST00000431098 498 ntBASIC5.87□□□□□ -1.47
CDH4P55283 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 Z84478.1-201ENST00000438230 1219 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC002504.1-201ENST00000438281 691 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC005297.1-201ENST00000444765 862 ntBASIC5.87□□□□□ -1.47
CDH4P55283 RPS27AP2-201ENST00000457576 465 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC090589.1-201ENST00000473109 362 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC087672.1-201ENST00000479876 766 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC104109.1-201ENST00000498563 436 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC109481.1-201ENST00000509173 282 ntBASIC5.87□□□□□ -1.47
CDH4P55283 IGLVIV-64-201ENST00000518581 301 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH4P55283 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 NPM1P42-201ENST00000560329 862 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 MIR4420-201ENST00000583944 77 ntBASIC5.87□□□□□ -1.47
CDH4P55283 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 LSM1P2-201ENST00000604911 322 ntBASIC5.87□□□□□ -1.47
CDH4P55283 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH4P55283 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH4P55283 AL592429.1-201ENST00000403909 1473 ntBASIC5.87□□□□□ -1.47
CDH4P55283 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CDH4P55283 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH4P55283 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 RN7SKP286-201ENST00000410894 299 ntBASIC5.86□□□□□ -1.47
CDH4P55283 RMRPP5-201ENST00000411156 267 ntBASIC5.86□□□□□ -1.47
CDH4P55283 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.86□□□□□ -1.47
CDH4P55283 BMS1P17-202ENST00000416720 316 ntBASIC5.86□□□□□ -1.47
CDH4P55283 NENFP1-201ENST00000419476 466 ntBASIC5.86□□□□□ -1.47
CDH4P55283 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 AC113412.1-201ENST00000425840 504 ntBASIC5.86□□□□□ -1.47
CDH4P55283 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 H3F3BP1-201ENST00000440551 403 ntBASIC5.86□□□□□ -1.47
CDH4P55283 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 DUTP1-201ENST00000493631 470 ntBASIC5.86□□□□□ -1.47
CDH4P55283 AC026782.2-201ENST00000510845 636 ntBASIC5.86□□□□□ -1.47
CDH4P55283 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH4P55283 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDH4P55283 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 AC007066.2-202ENST00000566531 914 ntBASIC5.86□□□□□ -1.47
CDH4P55283 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH4P55283 RNA5SP440-201ENST00000612665 119 ntBASIC5.86□□□□□ -1.47
CDH4P55283 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
CDH4P55283 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH4P55283 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH4P55283 AC008691.1-209ENST00000642094 814 ntBASIC5.86□□□□□ -1.47
CDH4P55283 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms