Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Upk1bQ9Z2C6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Upk1bQ9Z2C6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Gm6576-201ENSMUST00000169678 883 ntBASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1bQ9Z2C6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk1bQ9Z2C6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.71■□□□□ 0.1
Upk1bQ9Z2C6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk1bQ9Z2C6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Upk1bQ9Z2C6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Gm26524-201ENSMUST00000192339 390 ntBASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms