Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Mir3081-201ENSMUST00000175305 84 ntBASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm27742-201ENSMUST00000184667 60 ntBASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1h3Q9Z0Y9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm7153-201ENSMUST00000117092 455 ntBASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1h3Q9Z0Y9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.32■□□□□ 0.52
Nr1h3Q9Z0Y9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1h3Q9Z0Y9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Gm27357-201ENSMUST00000183754 135 ntBASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1h3Q9Z0Y9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms