Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clip2Q9Z0H8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip2Q9Z0H8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Gm33142-201ENSMUST00000193913 867 ntBASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Gm21362-201ENSMUST00000194272 928 ntBASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.65■□□□□ 0.74
Clip2Q9Z0H8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clip2Q9Z0H8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clip2Q9Z0H8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Gm37722-201ENSMUST00000193757 208 ntBASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Gm7367-201ENSMUST00000057611 492 ntBASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clip2Q9Z0H8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Gm13186-201ENSMUST00000118031 316 ntBASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip2Q9Z0H8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip2Q9Z0H8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms