Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Mir6349-201ENSMUST00000184059 97 ntBASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cr1Q9Z0D9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cr1Q9Z0D9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cr1Q9Z0D9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cr1Q9Z0D9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cr1Q9Z0D9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm11927-201ENSMUST00000118472 759 ntBASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm42642-201ENSMUST00000200683 355 ntBASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 AV356131-201ENSMUST00000206201 750 ntBASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cr1Q9Z0D9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms