Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.16□□□□□ -0.3
CcsQ9WU84 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Gm13148-201ENSMUST00000118892 745 ntBASIC13.15□□□□□ -0.3
CcsQ9WU84 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.15□□□□□ -0.3
CcsQ9WU84 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CcsQ9WU84 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcsQ9WU84 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcsQ9WU84 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CcsQ9WU84 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CcsQ9WU84 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CcsQ9WU84 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CcsQ9WU84 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.14□□□□□ -0.31
CcsQ9WU84 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.14□□□□□ -0.31
CcsQ9WU84 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.14□□□□□ -0.31
CcsQ9WU84 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CcsQ9WU84 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CcsQ9WU84 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CcsQ9WU84 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CcsQ9WU84 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CcsQ9WU84 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CcsQ9WU84 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CcsQ9WU84 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CcsQ9WU84 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Gm13216-201ENSMUST00000117145 591 ntBASIC13.13□□□□□ -0.31
CcsQ9WU84 Gm12441-201ENSMUST00000121806 588 ntBASIC13.13□□□□□ -0.31
CcsQ9WU84 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Gm4968-201ENSMUST00000071458 858 ntBASIC13.13□□□□□ -0.31
CcsQ9WU84 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms