Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Gm45328-201ENSMUST00000210942 917 ntBASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col13a1Q9R1N9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col13a1Q9R1N9 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.33□□□□□ -0.11
Col13a1Q9R1N9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col13a1Q9R1N9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col13a1Q9R1N9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Gm37722-201ENSMUST00000193757 208 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms