Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a4Q9QZR9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Mir8117-201ENSMUST00000184773 107 ntBASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a4Q9QZR9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a4Q9QZR9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a4Q9QZR9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Gm5682-201ENSMUST00000173402 505 ntBASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a4Q9QZR9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Gm25406-201ENSMUST00000157599 105 ntBASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a4Q9QZR9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.89■□□□□ 0.3
Col4a4Q9QZR9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a4Q9QZR9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a4Q9QZR9 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.89■□□□□ 0.29
Col4a4Q9QZR9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a4Q9QZR9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms