Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps29Q9QZ88 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Gm13216-201ENSMUST00000117145 591 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Gm715-201ENSMUST00000117865 831 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Gm22240-201ENSMUST00000175225 82 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Haglr-201ENSMUST00000100000 2085 ntBASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps29Q9QZ88 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Odf3b-204ENSMUST00000227834 930 ntBASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.16■□□□□ 0.18
Vps29Q9QZ88 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps29Q9QZ88 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps29Q9QZ88 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms