Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Gm5587-201ENSMUST00000206270 674 ntBASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shroom3Q9QXN0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.9■□□□□ 0.3
Shroom3Q9QXN0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.89■□□□□ 0.3
Shroom3Q9QXN0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom3Q9QXN0 Gm14859-201ENSMUST00000117752 357 ntBASIC16.89■□□□□ 0.3
Shroom3Q9QXN0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Shroom3Q9QXN0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom3Q9QXN0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shroom3Q9QXN0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Gm9013-201ENSMUST00000132939 882 ntBASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Gm18421-201ENSMUST00000204122 625 ntBASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom3Q9QXN0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms