Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1aQ9QWF0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1aQ9QWF0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.91■□□□□ 0.62
Chaf1aQ9QWF0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Gm12441-201ENSMUST00000121806 588 ntBASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1aQ9QWF0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chaf1aQ9QWF0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chaf1aQ9QWF0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chaf1aQ9QWF0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Gm12527-201ENSMUST00000117967 564 ntBASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Gm37292-201ENSMUST00000192062 758 ntBASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1aQ9QWF0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms