Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.25■□□□□ 0.35
Msh5Q9QUM7 Gm9519-201ENSMUST00000206108 1337 ntBASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh5Q9QUM7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh5Q9QUM7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Msh5Q9QUM7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms