Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn5aQ9JJV9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn5aQ9JJV9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn5aQ9JJV9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Gm6296-201ENSMUST00000222599 943 ntBASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.4■□□□□ 0.38
Scn5aQ9JJV9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn5aQ9JJV9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Scn5aQ9JJV9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Scn5aQ9JJV9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms