Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rbfox1Q9JJ43 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Gm20049-201ENSMUST00000219950 730 ntBASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rbfox1Q9JJ43 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rbfox1Q9JJ43 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rbfox1Q9JJ43 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms