Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Gm13036-201ENSMUST00000117799 748 ntBASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Gm7506-201ENSMUST00000207758 815 ntBASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1fQ9JIS7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Mir5131-201ENSMUST00000175426 93 ntBASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1fQ9JIS7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Gm25745-201ENSMUST00000174945 133 ntBASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1fQ9JIS7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1fQ9JIS7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1fQ9JIS7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1fQ9JIS7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cacna1fQ9JIS7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1fQ9JIS7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Gm12350-201ENSMUST00000121208 462 ntBASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Gm13312-201ENSMUST00000119631 718 ntBASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Gm6296-201ENSMUST00000222599 943 ntBASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1fQ9JIS7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Gm6376-201ENSMUST00000209407 580 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms