Protein–RNA interactions for Protein: Q9JI38

Pus3, tRNA pseudouridine(38/39) synthase, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pus3Q9JI38 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.05■□□□□ 0.8
Pus3Q9JI38 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pus3Q9JI38 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Gm6345-202ENSMUST00000180900 204 ntBASIC20.04■□□□□ 0.8
Pus3Q9JI38 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.04■□□□□ 0.8
Pus3Q9JI38 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pus3Q9JI38 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.03■□□□□ 0.8
Pus3Q9JI38 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pus3Q9JI38 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pus3Q9JI38 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pus3Q9JI38 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.02■□□□□ 0.79
Pus3Q9JI38 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pus3Q9JI38 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pus3Q9JI38 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pus3Q9JI38 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pus3Q9JI38 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.01■□□□□ 0.79
Pus3Q9JI38 Gm37722-201ENSMUST00000193757 208 ntBASIC20.01■□□□□ 0.79
Pus3Q9JI38 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pus3Q9JI38 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 AA414768-201ENSMUST00000121924 1257 ntBASIC20■□□□□ 0.79
Pus3Q9JI38 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20■□□□□ 0.79
Pus3Q9JI38 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pus3Q9JI38 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pus3Q9JI38 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms