Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Gm13534-201ENSMUST00000121169 513 ntBASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4bQ9ES00 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Gm42778-201ENSMUST00000199644 553 ntBASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4bQ9ES00 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4bQ9ES00 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube4bQ9ES00 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms