Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Gm10052-201ENSMUST00000168019 960 ntBASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Gm7729-201ENSMUST00000050143 801 ntBASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rrp8Q9DB85 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Phf7-203ENSMUST00000226565 1971 ntBASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rrp8Q9DB85 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rrp8Q9DB85 Grk6-206ENSMUST00000224995 2971 ntBASIC16.52■□□□□ 0.23
Rrp8Q9DB85 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rrp8Q9DB85 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rrp8Q9DB85 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rrp8Q9DB85 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rrp8Q9DB85 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Gm11452-201ENSMUST00000122376 690 ntBASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rrp8Q9DB85 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rrp8Q9DB85 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms