Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2aQ9DB34 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2aQ9DB34 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp2aQ9DB34 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp2aQ9DB34 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.64■□□□□ 0.42
Chmp2aQ9DB34 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Gm6433-201ENSMUST00000118634 875 ntBASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2aQ9DB34 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Gm18958-201ENSMUST00000174258 762 ntBASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Gm2274-201ENSMUST00000184539 609 ntBASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Il3ra-202ENSMUST00000223589 738 ntBASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.63■□□□□ 0.41
Chmp2aQ9DB34 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms