Protein–RNA interactions for Protein: Q9D9C0

1700109H08Rik, RIKEN cDNA 1700109H08 gene, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700109H08RikQ9D9C0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
1700109H08RikQ9D9C0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
1700109H08RikQ9D9C0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
1700109H08RikQ9D9C0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Gm18671-201ENSMUST00000214826 683 ntBASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
1700109H08RikQ9D9C0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Gm26571-201ENSMUST00000181399 666 ntBASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Gm8495-201ENSMUST00000188740 694 ntBASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
1700109H08RikQ9D9C0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
1700109H08RikQ9D9C0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
1700109H08RikQ9D9C0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
1700109H08RikQ9D9C0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms