Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.62■□□□□ 0.57
Rpap3Q9D706 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.62■□□□□ 0.57
Rpap3Q9D706 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap3Q9D706 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.61■□□□□ 0.57
Rpap3Q9D706 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Mir3081-201ENSMUST00000175305 84 ntBASIC18.61■□□□□ 0.57
Rpap3Q9D706 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Gm29707-201ENSMUST00000196325 491 ntBASIC18.61■□□□□ 0.57
Rpap3Q9D706 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpap3Q9D706 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Gm28033-201ENSMUST00000184224 96 ntBASIC18.6■□□□□ 0.57
Rpap3Q9D706 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rpap3Q9D706 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Gm15794-201ENSMUST00000120182 631 ntBASIC18.59■□□□□ 0.57
Rpap3Q9D706 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap3Q9D706 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap3Q9D706 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap3Q9D706 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap3Q9D706 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap3Q9D706 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Gm18421-201ENSMUST00000204122 625 ntBASIC18.58■□□□□ 0.56
Rpap3Q9D706 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap3Q9D706 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.57■□□□□ 0.56
Rpap3Q9D706 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Olfr129-201ENSMUST00000122318 993 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms