Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtl8cQ9D6I0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl8cQ9D6I0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl8cQ9D6I0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl8cQ9D6I0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl8cQ9D6I0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Gm715-201ENSMUST00000117865 831 ntBASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Gm27463-201ENSMUST00000183569 57 ntBASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtl8cQ9D6I0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtl8cQ9D6I0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtl8cQ9D6I0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Gm21814-202ENSMUST00000203277 873 ntBASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtl8cQ9D6I0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms