Protein–RNA interactions for Protein: Q9D4U4

H2al3, H2A histone family member L3, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al3Q9D4U4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2al3Q9D4U4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Gm13168-201ENSMUST00000121771 632 ntBASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Gm20760-201ENSMUST00000179197 648 ntBASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2al3Q9D4U4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Gm12085-201ENSMUST00000119263 940 ntBASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.72□□□□□ -0.21
H2al3Q9D4U4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2al3Q9D4U4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.71□□□□□ -0.21
H2al3Q9D4U4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2al3Q9D4U4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2al3Q9D4U4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms