Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Gm40848-201ENSMUST00000221998 324 ntBASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps33aQ9D2N9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Gm45417-201ENSMUST00000209533 758 ntBASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps33aQ9D2N9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps33aQ9D2N9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Vps33aQ9D2N9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vps33aQ9D2N9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Prob1-201ENSMUST00000097619 3021 ntBASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Vps33aQ9D2N9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Vps33aQ9D2N9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps33aQ9D2N9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms