Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rita1Q9D1H0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Gm11355-201ENSMUST00000121120 306 ntBASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rita1Q9D1H0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rita1Q9D1H0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm5587-201ENSMUST00000206270 674 ntBASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rita1Q9D1H0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rita1Q9D1H0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rita1Q9D1H0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rita1Q9D1H0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms