Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Gm7370-201ENSMUST00000219471 767 ntBASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp3Q9D032 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssbp3Q9D032 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.08□□□□□ -0.15
Ssbp3Q9D032 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ssbp3Q9D032 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssbp3Q9D032 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp3Q9D032 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Gm6659-201ENSMUST00000174752 547 ntBASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ssbp3Q9D032 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm27389-201ENSMUST00000183622 195 ntBASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm8969-201ENSMUST00000199694 526 ntBASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.06□□□□□ -0.16
Ssbp3Q9D032 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Gm7213-201ENSMUST00000215977 950 ntBASIC14.05□□□□□ -0.16
Ssbp3Q9D032 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms