Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Raet1eQ9CZQ6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Raet1eQ9CZQ6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Raet1eQ9CZQ6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Raet1eQ9CZQ6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Flg-201ENSMUST00000050758 1488 ntBASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Raet1eQ9CZQ6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Raet1eQ9CZQ6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms