Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Gm10493-201ENSMUST00000097270 612 ntBASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Hdhd3Q9CYW4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Mir2861-201ENSMUST00000175539 82 ntBASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Gm10033-202ENSMUST00000211874 928 ntBASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdhd3Q9CYW4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Zfp783-201ENSMUST00000095946 670 ntBASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdhd3Q9CYW4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms