Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssbp1Q9CYR0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssbp1Q9CYR0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssbp1Q9CYR0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssbp1Q9CYR0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms