Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nip7Q9CXK8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nip7Q9CXK8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Nip7Q9CXK8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Gm18733-201ENSMUST00000173950 856 ntBASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nip7Q9CXK8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21■□□□□ 0.95
Nip7Q9CXK8 Zfp264-201ENSMUST00000208656 1563 ntBASIC21■□□□□ 0.95
Nip7Q9CXK8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21■□□□□ 0.95
Nip7Q9CXK8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21■□□□□ 0.95
Nip7Q9CXK8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21■□□□□ 0.95
Nip7Q9CXK8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nip7Q9CXK8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21■□□□□ 0.95
Nip7Q9CXK8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Gm13312-201ENSMUST00000119631 718 ntBASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nip7Q9CXK8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nip7Q9CXK8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Rprl3-201ENSMUST00000157400 290 ntBASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Gm18195-201ENSMUST00000207604 706 ntBASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nip7Q9CXK8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.96■□□□□ 0.95
Nip7Q9CXK8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms