Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1lQ9CXF7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Gm44549-201ENSMUST00000208351 577 ntBASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Gm6365-201ENSMUST00000054711 744 ntBASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Flg-201ENSMUST00000050758 1488 ntBASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1lQ9CXF7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Mtag2-201ENSMUST00000058665 714 ntBASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1lQ9CXF7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.12■□□□□ 0.65
Chd1lQ9CXF7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1lQ9CXF7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chd1lQ9CXF7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1lQ9CXF7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1lQ9CXF7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1lQ9CXF7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms