Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rnaseh2aQ9CWY8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnaseh2aQ9CWY8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnaseh2aQ9CWY8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnaseh2aQ9CWY8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm7222-201ENSMUST00000117512 906 ntBASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm11780-201ENSMUST00000136880 516 ntBASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnaseh2aQ9CWY8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm8396-201ENSMUST00000057361 823 ntBASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnaseh2aQ9CWY8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm5745-201ENSMUST00000183748 313 ntBASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnaseh2aQ9CWY8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Idnk-204ENSMUST00000226010 1898 ntBASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnaseh2aQ9CWY8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnaseh2aQ9CWY8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 BC021767-201ENSMUST00000126387 1716 ntBASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.08■□□□□ 0.81
Rnaseh2aQ9CWY8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms