Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Gm10231-201ENSMUST00000181584 441 ntBASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Gm10175-202ENSMUST00000208752 441 ntBASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sft2d3Q9CSV6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sft2d3Q9CSV6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Gm7889-201ENSMUST00000185591 958 ntBASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sft2d3Q9CSV6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sft2d3Q9CSV6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sft2d3Q9CSV6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms