Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Gm27000-201ENSMUST00000182943 842 ntBASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Odf3b-204ENSMUST00000227834 930 ntBASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc40Q9CRC8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Gm715-201ENSMUST00000117865 831 ntBASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc40Q9CRC8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrc40Q9CRC8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrc40Q9CRC8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lrrc40Q9CRC8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lrrc40Q9CRC8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrc40Q9CRC8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrc40Q9CRC8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms