Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gm15467-201ENSMUST00000120582 445 ntBASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gm43575-201ENSMUST00000196420 516 ntBASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldnd1Q9CQX5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.29■□□□□ 0.36
Cldnd1Q9CQX5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldnd1Q9CQX5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldnd1Q9CQX5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cldnd1Q9CQX5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms