Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61bQ9CQS8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Gm43272-201ENSMUST00000200599 1584 ntBASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sec61bQ9CQS8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Gm7153-201ENSMUST00000117092 455 ntBASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sec61bQ9CQS8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 BC043934-202ENSMUST00000185694 2356 ntBASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms