Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q9CQC3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.54■□□□□ 0.4
Q9CQC3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.54■□□□□ 0.4
Q9CQC3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CQC3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q9CQC3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q9CQC3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q9CQC3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Q9CQC3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Q9CQC3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CQC3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.52■□□□□ 0.4
Q9CQC3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CQC3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Q9CQC3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.52■□□□□ 0.39
Q9CQC3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CQC3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Q9CQC3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Q9CQC3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Q9CQC3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.51■□□□□ 0.39
Q9CQC3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.51■□□□□ 0.39
Q9CQC3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.51■□□□□ 0.39
Q9CQC3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.51■□□□□ 0.39
Q9CQC3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Q9CQC3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.51■□□□□ 0.39
Q9CQC3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Q9CQC3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.51■□□□□ 0.39
Q9CQC3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CQC3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Q9CQC3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.5■□□□□ 0.39
Q9CQC3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.5■□□□□ 0.39
Q9CQC3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Q9CQC3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.5■□□□□ 0.39
Q9CQC3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
Q9CQC3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Q9CQC3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
Q9CQC3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CQC3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.49■□□□□ 0.39
Q9CQC3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.49■□□□□ 0.39
Q9CQC3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.49■□□□□ 0.39
Q9CQC3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.49■□□□□ 0.39
Q9CQC3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q9CQC3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CQC3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.49■□□□□ 0.39
Q9CQC3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q9CQC3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CQC3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Q9CQC3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CQC3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CQC3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms