Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chchd1Q9CQA6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chchd1Q9CQA6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chchd1Q9CQA6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Chchd1Q9CQA6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Chchd1Q9CQA6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Chchd1Q9CQA6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Mir8112-201ENSMUST00000184382 131 ntBASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chchd1Q9CQA6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms