Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.88■□□□□ 0.77
Hdac9Q99N13 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac9Q99N13 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Gm18421-201ENSMUST00000204122 625 ntBASIC19.87■□□□□ 0.77
Hdac9Q99N13 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.87■□□□□ 0.77
Hdac9Q99N13 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac9Q99N13 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Rprl3-201ENSMUST00000157400 290 ntBASIC19.86■□□□□ 0.77
Hdac9Q99N13 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 AW822252-206ENSMUST00000208904 237 ntBASIC19.86■□□□□ 0.77
Hdac9Q99N13 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Gm5867-201ENSMUST00000063197 592 ntBASIC19.86■□□□□ 0.77
Hdac9Q99N13 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac9Q99N13 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.85■□□□□ 0.77
Hdac9Q99N13 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.85■□□□□ 0.77
Hdac9Q99N13 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.85■□□□□ 0.77
Hdac9Q99N13 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Hdac9Q99N13 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Hdac9Q99N13 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Gm13312-201ENSMUST00000119631 718 ntBASIC19.83■□□□□ 0.77
Hdac9Q99N13 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac9Q99N13 Rps4l-201ENSMUST00000071745 943 ntBASIC19.83■□□□□ 0.77
Hdac9Q99N13 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac9Q99N13 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac9Q99N13 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms