Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf111Q99ML9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf111Q99ML9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf111Q99ML9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf111Q99ML9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf111Q99ML9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms