Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Phf7-203ENSMUST00000226565 1971 ntBASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-1Q99MA9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gm13186-201ENSMUST00000118031 316 ntBASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gm27000-201ENSMUST00000182943 842 ntBASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-1Q99MA9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Mir8112-201ENSMUST00000184382 131 ntBASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-1Q99MA9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-1Q99MA9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx6-1Q99MA9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx6-1Q99MA9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx6-1Q99MA9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx6-1Q99MA9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms