Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smtnl1Q99LM3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Smtnl1Q99LM3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smtnl1Q99LM3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smtnl1Q99LM3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smtnl1Q99LM3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smtnl1Q99LM3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Smtnl1Q99LM3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smtnl1Q99LM3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smtnl1Q99LM3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smtnl1Q99LM3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Smtnl1Q99LM3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smtnl1Q99LM3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smtnl1Q99LM3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms