Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd3Q99LE3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd3Q99LE3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd3Q99LE3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd3Q99LE3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd3Q99LE3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms