Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Gm11452-201ENSMUST00000122376 690 ntBASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd2Q99JR8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Rprl3-201ENSMUST00000157400 290 ntBASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcd2Q99JR8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Gm13312-201ENSMUST00000119631 718 ntBASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Gm18195-201ENSMUST00000207604 706 ntBASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smarcd2Q99JR8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Gm12644-201ENSMUST00000119935 606 ntBASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd2Q99JR8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms