Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc1bQ920F6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc1bQ920F6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc1bQ920F6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smc1bQ920F6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc1bQ920F6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.46■□□□□ 0.71
Smc1bQ920F6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smc1bQ920F6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc1bQ920F6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.46■□□□□ 0.7
Smc1bQ920F6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Gm24589-201ENSMUST00000116692 94 ntBASIC19.45■□□□□ 0.7
Smc1bQ920F6 Gm11950-201ENSMUST00000121615 838 ntBASIC19.45■□□□□ 0.7
Smc1bQ920F6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Gm7213-201ENSMUST00000215977 950 ntBASIC19.45■□□□□ 0.7
Smc1bQ920F6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.45■□□□□ 0.7
Smc1bQ920F6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc1bQ920F6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.44■□□□□ 0.7
Smc1bQ920F6 Gm24841-201ENSMUST00000158676 357 ntBASIC19.44■□□□□ 0.7
Smc1bQ920F6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smc1bQ920F6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.43■□□□□ 0.7
Smc1bQ920F6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Gm6443-201ENSMUST00000203599 874 ntBASIC19.43■□□□□ 0.7
Smc1bQ920F6 Gm18115-201ENSMUST00000221209 621 ntBASIC19.43■□□□□ 0.7
Smc1bQ920F6 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.43■□□□□ 0.7
Smc1bQ920F6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smc1bQ920F6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Smc1bQ920F6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms