Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Gm27389-201ENSMUST00000183622 195 ntBASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Gm7213-201ENSMUST00000215977 950 ntBASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb2Q91Y00 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb2Q91Y00 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb2Q91Y00 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Gm18032-201ENSMUST00000222541 538 ntBASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb2Q91Y00 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Mir1668-201ENSMUST00000184114 107 ntBASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb2Q91Y00 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb2Q91Y00 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms