Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Gm22240-201ENSMUST00000175225 82 ntBASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb3Q91XZ7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb3Q91XZ7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb3Q91XZ7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Gm37856-201ENSMUST00000191634 999 ntBASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb3Q91XZ7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb3Q91XZ7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms