Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Gm15378-201ENSMUST00000121894 207 ntBASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb4Q91XZ6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb4Q91XZ6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Gm10698-201ENSMUST00000182663 604 ntBASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb4Q91XZ6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Gm10653-202ENSMUST00000139570 835 ntBASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb4Q91XZ6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb4Q91XZ6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb4Q91XZ6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb4Q91XZ6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms